Package: coglasso 1.1.0.9000

coglasso: Collaborative Graphical Lasso - Multi-Omics Network Reconstruction

Reconstruct networks from multi-omics data sets with the collaborative graphical lasso (coglasso) algorithm described in Albanese, A., Kohlen, W., and Behrouzi, P. (2024) <doi:10.48550/arXiv.2403.18602>. Use the main wrapper function `bs()` to build and select a multi-omics network.

Authors:Alessio Albanese [aut, cre, cph], Pariya Behrouzi [aut]

coglasso_1.1.0.9000.tar.gz
coglasso_1.1.0.9000.zip(r-4.7)coglasso_1.1.0.9000.zip(r-4.6)coglasso_1.1.0.9000.zip(r-4.5)
coglasso_1.1.0.9000.tgz(r-4.6-x86_64)coglasso_1.1.0.9000.tgz(r-4.6-arm64)coglasso_1.1.0.9000.tgz(r-4.5-x86_64)coglasso_1.1.0.9000.tgz(r-4.5-arm64)
coglasso_1.1.0.9000.tar.gz(r-4.7-arm64)coglasso_1.1.0.9000.tar.gz(r-4.7-x86_64)coglasso_1.1.0.9000.tar.gz(r-4.6-arm64)coglasso_1.1.0.9000.tar.gz(r-4.6-x86_64)
coglasso_1.1.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
coglasso/json (API)
NEWS

# Install 'coglasso' in R:
install.packages('coglasso', repos = c('https://drquestion.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/drquestion/coglasso/issues

Pkgdown/docs site:https://drquestion.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:

cpp

5.22 score 3 stars 11 scripts 158 downloads 8 exports 14 dependencies

Last updated from:297d96d867. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK158
linux-devel-x86_64OK192
source / vignettesOK201
linux-release-arm64OK173
linux-release-x86_64OK305
macos-release-arm64OK162
macos-release-x86_64OK379
macos-oldrel-arm64OK167
macos-oldrel-x86_64OK331
windows-develOK324
windows-releaseOK152
windows-oldrelOK145
wasm-releaseOK107

Exports:bscoglassoget_networkget_pcorselect_coglassostars_coglassoxestarsxstars

Dependencies:clicpp11glueigraphlatticelifecyclemagrittrMatrixpkgconfigRcppRcppEigenrlangvctrswithr

Reconstructing mult-omics networks with coglasso

Rendered fromcoglasso.Rmdusingknitr::rmarkdownon May 28 2026.

Last update: 2024-05-03
Started: 2023-11-07

Reproduction of manuscript's results

Rendered frommanuscript.Rmdusingknitr::rmarkdownon May 28 2026.

Last update: 2024-05-03
Started: 2023-11-08